Top 10 genes with highest correlation to Rv2062c/cobN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0843/- | (cc=0.6718) | info on Rv0843/- |
| Rv3026c/- | (cc=0.6323) | info on Rv3026c/- |
| Rv3566c/nat | (cc=0.607) | info on Rv3566c/nat |
| Rv1997/ctpF | (cc=0.5839) | info on Rv1997/ctpF |
| Rv0849/- | (cc=0.5778) | info on Rv0849/- |
| Rv0488/- | (cc=0.5512) | info on Rv0488/- |
| Rv3065/mmr | (cc=0.5512) | info on Rv3065/mmr |
| Rv0570/nrdZ | (cc=0.5263) | info on Rv0570/nrdZ |
| Rv2306A/- | (cc=0.5182) | info on Rv2306A/- |
| Rv1834/lipZ | (cc=0.5124) | info on Rv1834/lipZ |
Correlation of Rv2062c/cobN with Rv0488/-
Normalized LFCs for Rv2062c/cobN:
(description and provenance of datasets)
| Rv2062c/cobN | Rv0488/- | |
| Fe_supp_jason_reseq | -0.444 | 0.414 |
| low_pH_jason_reseq | -0.746 | -0.013 |
| NO_jason_reseq | -0.299 | -0.323 |
| B6_jason_reseq | 0.135 | 0.749 |
| MHCII_jason_reseq | -0.388 | 0.793 |
| Isoniazid02 | -0.851 | -1.829 |
| Rifampicin4 | 0.338 | 0.257 |
| Ethambutol3 | -0.946 | -1.35 |
| Meropenem3 | -1.174 | -1.118 |
| Vancomycin16 | -0.451 | -0.586 |
| Rv2680_day32 | 0.197 | 0.82 |
| H37Rv_KO_MarP | -0.106 | 0.219 |
| hypoxia_3wks | -0.175 | -1.244 |
| hypoxia_6wks | 0.384 | 0.123 |
| glycerol | -0.6 | -1.166 |
| cholesterol | 0.017 | -0.197 |
| AJ | 0.355 | 0.756 |
| Bibs02 | 0.298 | 0.636 |
| Bibs02c | 0.32 | 0.855 |
| BL6 | -0.107 | -0.052 |
| BL6a | -0.527 | 0.05 |
| BXD01 | -0.233 | -0.416 |
| BXD010 | -0.719 | 0.746 |
| BXD011 | -1.168 | -0.347 |
| BXD03 | -0.843 | 0.368 |
| BXD04 | -0.598 | -0.915 |
| BXD05 | -0.531 | -0.122 |
| BXD06 | -0.723 | -0.007 |
| BXD07 | -0.477 | 0.014 |
| BXD08 | -0.525 | -0.53 |
| BXD09 | -0.789 | -0.44 |
| CAST | 0.28 | 0.617 |
| CCcont | -0.353 | -0.265 |
| DS01 | 0.212 | 1.574 |
| DS02 | 0.717 | 1.241 |
| DS04 | 0.975 | 0.966 |
| DS0c | -0.185 | 1.381 |
| GP01 | -0.442 | -0.827 |
| GP02 | 0.767 | -0.615 |
| GP0c | -0.469 | -0.547 |
| NOD | -0.192 | -0.687 |
| NZO | 0.0 | -0.116 |
| PWK | -0.219 | -0.02 |
| H37Rv_KO_CtpC | -0.291 | 0.016 |
| H37Rv_KO_CtpD | 0.154 | 0.379 |
| H37Rv_KO_Rv1272 | -0.313 | 0.963 |
| H37Rv_KO_SugABC | 0.658 | 0.226 |
| H37Rv_KO_MbtN | 0.331 | 0.741 |
| Trans05 | 0.172 | -0.391 |
| macrophage_unactivated | -0.65 | -0.489 |
| IL1 | -0.78 | -1.771 |
| Rapamycin | -0.387 | -1.071 |
| Tcell | -0.671 | -0.593 |
| GMCSF | -0.129 | -0.605 |
| IFNab | -0.224 | 0.073 |
| IFNg | -0.551 | -0.69 |
| IFNg_GMCSF1 | 0.434 | 0.368 |
| Rv1432_day32 | 0.458 | 0.438 |
| Rv1565c_day32 | -0.13 | 0.035 |
| secA2_input | -0.545 | -0.099 |
| delta_Rv3594 | -0.135 | 0.355 |
| delta_Rv3717 | 0.122 | -0.279 |
| delta_Rv3811 | -0.086 | 0.067 |
| delta_Rv0954 | -0.322 | 0.039 |
| PonA1 | 0.032 | -0.32 |
| EccD1_KO | 1.046 | 0.247 |
| EspI_KO | 0.528 | 1.223 |
| PE35_KO | 0.169 | 0.315 |
| PPE68_KO | 0.246 | 0.285 |
| glycerol2 | 0.143 | 1.883 |
| lignocerate | 0.55 | 2.04 |
| oleate | 0.088 | 0.608 |
| phosphatidylcholine | 0.224 | 1.756 |
| acetate | 0.479 | 2.287 |
| glucAc | 0.385 | 1.932 |
| Rv0950ko | 0.41 | 0.745 |
| Rv1096ko | 0.464 | -0.507 |
| Rv3684ko | 0.445 | -0.406 |
| delta_otsA_trehalose | -0.953 | 0.152 |