Top 10 genes with highest correlation to Rv2037c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0621/- | (cc=0.4691) | info on Rv0621/- |
| Rv0449c/- | (cc=0.4524) | info on Rv0449c/- |
| Rv3362c/- | (cc=0.445) | info on Rv3362c/- |
| Rv0731c/- | (cc=0.4333) | info on Rv0731c/- |
| Rv0004/- | (cc=0.4332) | info on Rv0004/- |
| Rv1104/- | (cc=0.4268) | info on Rv1104/- |
| Rv1267c/embR | (cc=0.424) | info on Rv1267c/embR |
| Rv0764c/cyp51 | (cc=0.4185) | info on Rv0764c/cyp51 |
| Rv2601/speE | (cc=0.4173) | info on Rv2601/speE |
| Rv2123/PPE37 | (cc=0.4057) | info on Rv2123/PPE37 |
Correlation of Rv2037c/- with Rv3362c/-
Normalized LFCs for Rv2037c/-:
(description and provenance of datasets)
| Rv2037c/- | Rv3362c/- | |
| Fe_supp_jason_reseq | -2.927 | -0.451 |
| low_pH_jason_reseq | -0.816 | -1.251 |
| NO_jason_reseq | 1.796 | -0.751 |
| B6_jason_reseq | -0.64 | 0.202 |
| MHCII_jason_reseq | -0.376 | 0.178 |
| Isoniazid02 | -0.418 | -0.06 |
| Rifampicin4 | 0.0 | -0.184 |
| Ethambutol3 | -0.613 | 0.285 |
| Meropenem3 | -0.276 | -0.653 |
| Vancomycin16 | -0.064 | -0.451 |
| Rv2680_day32 | -1.894 | -0.351 |
| H37Rv_KO_MarP | -0.265 | 0.595 |
| hypoxia_3wks | 0.606 | -0.08 |
| hypoxia_6wks | 1.05 | 0.313 |
| glycerol | -0.758 | 1.387 |
| cholesterol | -0.847 | 1.34 |
| AJ | 0.61 | 1.106 |
| Bibs02 | -1.482 | 0.026 |
| Bibs02c | 0.523 | -0.332 |
| BL6 | -0.469 | -1.794 |
| BL6a | 0.096 | -1.818 |
| BXD01 | -1.153 | -1.725 |
| BXD010 | -1.535 | -1.538 |
| BXD011 | -0.987 | -1.169 |
| BXD03 | -0.957 | -0.921 |
| BXD04 | -0.587 | -1.226 |
| BXD05 | -2.116 | -0.465 |
| BXD06 | -1.747 | -1.048 |
| BXD07 | -1.281 | -0.943 |
| BXD08 | -0.378 | -1.537 |
| BXD09 | -0.95 | -1.593 |
| CAST | -0.24 | 0.462 |
| CCcont | -1.057 | -1.398 |
| DS01 | -0.57 | -0.354 |
| DS02 | 0.515 | -0.602 |
| DS04 | 1.13 | -0.555 |
| DS0c | 0.625 | 0.448 |
| GP01 | 0.699 | -0.404 |
| GP02 | 2.043 | -1.444 |
| GP0c | -0.066 | -0.229 |
| NOD | 2.724 | 3.811 |
| NZO | 0.364 | -1.358 |
| PWK | -0.783 | -0.379 |
| H37Rv_KO_CtpC | -0.498 | -0.832 |
| H37Rv_KO_CtpD | -1.814 | -0.338 |
| H37Rv_KO_Rv1272 | 1.627 | 1.681 |
| H37Rv_KO_SugABC | 1.04 | 0.931 |
| H37Rv_KO_MbtN | 0.113 | -0.388 |
| Trans05 | -0.459 | -1.51 |
| macrophage_unactivated | -0.316 | 2.124 |
| IL1 | 0.276 | -0.389 |
| Rapamycin | -0.632 | -0.924 |
| Tcell | 0.303 | -1.153 |
| GMCSF | 0.124 | 0.61 |
| IFNab | -0.148 | -1.493 |
| IFNg | 0.484 | 1.692 |
| IFNg_GMCSF1 | 0.148 | 0.066 |
| Rv1432_day32 | -0.568 | 0.0 |
| Rv1565c_day32 | -0.553 | -0.698 |
| secA2_input | 1.52 | 1.722 |
| delta_Rv3594 | 1.227 | 1.53 |
| delta_Rv3717 | 1.436 | 1.53 |
| delta_Rv3811 | 0.306 | 0.294 |
| delta_Rv0954 | 0.225 | 2.048 |
| PonA1 | 0.275 | 1.272 |
| EccD1_KO | -0.335 | -0.918 |
| EspI_KO | 0.271 | 0.667 |
| PE35_KO | 0.86 | 0.312 |
| PPE68_KO | 0.496 | 0.659 |
| glycerol2 | -0.475 | -0.709 |
| lignocerate | -1.259 | -0.725 |
| oleate | -0.147 | -0.56 |
| phosphatidylcholine | -0.727 | -0.749 |
| acetate | -0.708 | 0.163 |
| glucAc | -2.033 | 0.082 |
| Rv0950ko | -0.501 | 0.464 |
| Rv1096ko | -1.068 | -0.356 |
| Rv3684ko | -0.544 | -1.411 |
| delta_otsA_trehalose | 0.696 | 1.004 |