Top 10 genes with highest correlation to Rv2037c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0621/- | (cc=0.4691) | info on Rv0621/- |
| Rv0449c/- | (cc=0.4524) | info on Rv0449c/- |
| Rv3362c/- | (cc=0.445) | info on Rv3362c/- |
| Rv0731c/- | (cc=0.4333) | info on Rv0731c/- |
| Rv0004/- | (cc=0.4332) | info on Rv0004/- |
| Rv1104/- | (cc=0.4268) | info on Rv1104/- |
| Rv1267c/embR | (cc=0.424) | info on Rv1267c/embR |
| Rv0764c/cyp51 | (cc=0.4185) | info on Rv0764c/cyp51 |
| Rv2601/speE | (cc=0.4173) | info on Rv2601/speE |
| Rv2123/PPE37 | (cc=0.4057) | info on Rv2123/PPE37 |
Correlation of Rv2037c/- with Rv2123/PPE37
Normalized LFCs for Rv2037c/-:
(description and provenance of datasets)
| Rv2037c/- | Rv2123/PPE37 | |
| Fe_supp_jason_reseq | -2.927 | -0.702 |
| low_pH_jason_reseq | -0.816 | -0.51 |
| NO_jason_reseq | 1.796 | 0.05 |
| B6_jason_reseq | -0.64 | -0.184 |
| MHCII_jason_reseq | -0.376 | 0.434 |
| Isoniazid02 | -0.418 | -0.3 |
| Rifampicin4 | 0.0 | 0.333 |
| Ethambutol3 | -0.613 | -0.531 |
| Meropenem3 | -0.276 | 1.005 |
| Vancomycin16 | -0.064 | -0.334 |
| Rv2680_day32 | -1.894 | 0.916 |
| H37Rv_KO_MarP | -0.265 | -0.241 |
| hypoxia_3wks | 0.606 | -0.056 |
| hypoxia_6wks | 1.05 | 0.535 |
| glycerol | -0.758 | 0.083 |
| cholesterol | -0.847 | -0.583 |
| AJ | 0.61 | 0.24 |
| Bibs02 | -1.482 | -0.951 |
| Bibs02c | 0.523 | 0.685 |
| BL6 | -0.469 | -0.332 |
| BL6a | 0.096 | 0.485 |
| BXD01 | -1.153 | -0.102 |
| BXD010 | -1.535 | -0.795 |
| BXD011 | -0.987 | -0.31 |
| BXD03 | -0.957 | 0.044 |
| BXD04 | -0.587 | -0.825 |
| BXD05 | -2.116 | -0.218 |
| BXD06 | -1.747 | -0.116 |
| BXD07 | -1.281 | -0.146 |
| BXD08 | -0.378 | -0.045 |
| BXD09 | -0.95 | -0.149 |
| CAST | -0.24 | 0.39 |
| CCcont | -1.057 | -0.601 |
| DS01 | -0.57 | 0.209 |
| DS02 | 0.515 | 0.274 |
| DS04 | 1.13 | 1.183 |
| DS0c | 0.625 | 0.071 |
| GP01 | 0.699 | 0.921 |
| GP02 | 2.043 | 0.723 |
| GP0c | -0.066 | 0.618 |
| NOD | 2.724 | 0.444 |
| NZO | 0.364 | 0.129 |
| PWK | -0.783 | -0.189 |
| H37Rv_KO_CtpC | -0.498 | -0.201 |
| H37Rv_KO_CtpD | -1.814 | -0.406 |
| H37Rv_KO_Rv1272 | 1.627 | 0.546 |
| H37Rv_KO_SugABC | 1.04 | 0.492 |
| H37Rv_KO_MbtN | 0.113 | -0.428 |
| Trans05 | -0.459 | 0.404 |
| macrophage_unactivated | -0.316 | -0.48 |
| IL1 | 0.276 | -0.581 |
| Rapamycin | -0.632 | -0.792 |
| Tcell | 0.303 | -0.544 |
| GMCSF | 0.124 | 0.333 |
| IFNab | -0.148 | -0.121 |
| IFNg | 0.484 | -0.732 |
| IFNg_GMCSF1 | 0.148 | -0.082 |
| Rv1432_day32 | -0.568 | 0.145 |
| Rv1565c_day32 | -0.553 | 0.021 |
| secA2_input | 1.52 | 0.614 |
| delta_Rv3594 | 1.227 | 0.6 |
| delta_Rv3717 | 1.436 | 0.401 |
| delta_Rv3811 | 0.306 | 0.134 |
| delta_Rv0954 | 0.225 | 0.05 |
| PonA1 | 0.275 | 1.192 |
| EccD1_KO | -0.335 | 1.131 |
| EspI_KO | 0.271 | 0.428 |
| PE35_KO | 0.86 | 0.306 |
| PPE68_KO | 0.496 | 0.41 |
| glycerol2 | -0.475 | 0.195 |
| lignocerate | -1.259 | 0.404 |
| oleate | -0.147 | 0.238 |
| phosphatidylcholine | -0.727 | 0.373 |
| acetate | -0.708 | 0.027 |
| glucAc | -2.033 | 0.188 |
| Rv0950ko | -0.501 | 1.04 |
| Rv1096ko | -1.068 | 1.074 |
| Rv3684ko | -0.544 | 0.095 |
| delta_otsA_trehalose | 0.696 | 0.596 |