TnSeqCorr

Top 10 genes with highest correlation to Rv2037c/-:

update plotcorrelationlink to info on gene
Rv0621/- (cc=0.4691) info on Rv0621/-
Rv0449c/- (cc=0.4524) info on Rv0449c/-
Rv3362c/- (cc=0.445) info on Rv3362c/-
Rv0731c/- (cc=0.4333) info on Rv0731c/-
Rv0004/- (cc=0.4332) info on Rv0004/-
Rv1104/- (cc=0.4268) info on Rv1104/-
Rv1267c/embR (cc=0.424) info on Rv1267c/embR
Rv0764c/cyp51 (cc=0.4185) info on Rv0764c/cyp51
Rv2601/speE (cc=0.4173) info on Rv2601/speE
Rv2123/PPE37 (cc=0.4057) info on Rv2123/PPE37

Correlation of Rv2037c/- with Rv1267c/embR

Normalized LFCs for Rv2037c/-:
(description and provenance of datasets)
Rv2037c/-Rv1267c/embR
Fe_supp_jason_reseq

-2.927

-0.406

low_pH_jason_reseq

-0.816

-0.234

NO_jason_reseq

1.796

0.184

B6_jason_reseq

-0.64

0.172

MHCII_jason_reseq

-0.376

1.059

Isoniazid02

-0.418

-0.367

Rifampicin4

0.0

-0.06

Ethambutol3

-0.613

-0.291

Meropenem3

-0.276

-0.195

Vancomycin16

-0.064

-0.369

Rv2680_day32

-1.894

-0.344

H37Rv_KO_MarP

-0.265

0.683

hypoxia_3wks

0.606

-0.566

hypoxia_6wks

1.05

-0.679

glycerol

-0.758

-0.199

cholesterol

-0.847

-0.3

AJ

0.61

0.449

Bibs02

-1.482

0.045

Bibs02c

0.523

0.917

BL6

-0.469

-0.098

BL6a

0.096

0.58

BXD01

-1.153

-0.084

BXD010

-1.535

0.1

BXD011

-0.987

0.1

BXD03

-0.957

-0.725

BXD04

-0.587

0.77

BXD05

-2.116

-0.453

BXD06

-1.747

-0.077

BXD07

-1.281

0.365

BXD08

-0.378

-0.113

BXD09

-0.95

0.242

CAST

-0.24

0.652

CCcont

-1.057

-0.221

DS01

-0.57

0.13

DS02

0.515

-0.041

DS04

1.13

0.446

DS0c

0.625

0.207

GP01

0.699

1.658

GP02

2.043

2.343

GP0c

-0.066

1.044

NOD

2.724

0.812

NZO

0.364

0.555

PWK

-0.783

0.35

H37Rv_KO_CtpC

-0.498

-0.386

H37Rv_KO_CtpD

-1.814

-0.272

H37Rv_KO_Rv1272

1.627

0.808

H37Rv_KO_SugABC

1.04

-0.342

H37Rv_KO_MbtN

0.113

-0.102

Trans05

-0.459

0.54

macrophage_unactivated

-0.316

0.395

IL1

0.276

0.486

Rapamycin

-0.632

0.068

Tcell

0.303

0.984

GMCSF

0.124

-0.235

IFNab

-0.148

-0.828

IFNg

0.484

0.946

IFNg_GMCSF1

0.148

0.694

Rv1432_day32

-0.568

0.188

Rv1565c_day32

-0.553

0.292

secA2_input

1.52

-0.2

delta_Rv3594

1.227

0.792

delta_Rv3717

1.436

0.944

delta_Rv3811

0.306

0.208

delta_Rv0954

0.225

0.699

PonA1

0.275

0.278

EccD1_KO

-0.335

1.125

EspI_KO

0.271

0.388

PE35_KO

0.86

1.03

PPE68_KO

0.496

0.518

glycerol2

-0.475

0.273

lignocerate

-1.259

0.581

oleate

-0.147

0.33

phosphatidylcholine

-0.727

0.545

acetate

-0.708

0.51

glucAc

-2.033

0.045

Rv0950ko

-0.501

0.308

Rv1096ko

-1.068

0.715

Rv3684ko

-0.544

0.475

delta_otsA_trehalose

0.696

0.858