Top 10 genes with highest correlation to Rv2037c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0621/- | (cc=0.4691) | info on Rv0621/- |
| Rv0449c/- | (cc=0.4524) | info on Rv0449c/- |
| Rv3362c/- | (cc=0.445) | info on Rv3362c/- |
| Rv0731c/- | (cc=0.4333) | info on Rv0731c/- |
| Rv0004/- | (cc=0.4332) | info on Rv0004/- |
| Rv1104/- | (cc=0.4268) | info on Rv1104/- |
| Rv1267c/embR | (cc=0.424) | info on Rv1267c/embR |
| Rv0764c/cyp51 | (cc=0.4185) | info on Rv0764c/cyp51 |
| Rv2601/speE | (cc=0.4173) | info on Rv2601/speE |
| Rv2123/PPE37 | (cc=0.4057) | info on Rv2123/PPE37 |
Correlation of Rv2037c/- with Rv1104/-
Normalized LFCs for Rv2037c/-:
(description and provenance of datasets)
| Rv2037c/- | Rv1104/- | |
| Fe_supp_jason_reseq | -2.927 | -0.407 |
| low_pH_jason_reseq | -0.816 | 0.693 |
| NO_jason_reseq | 1.796 | 0.562 |
| B6_jason_reseq | -0.64 | -0.878 |
| MHCII_jason_reseq | -0.376 | 0.214 |
| Isoniazid02 | -0.418 | -0.049 |
| Rifampicin4 | 0.0 | 0.246 |
| Ethambutol3 | -0.613 | -0.05 |
| Meropenem3 | -0.276 | 0.884 |
| Vancomycin16 | -0.064 | 0.501 |
| Rv2680_day32 | -1.894 | 0.478 |
| H37Rv_KO_MarP | -0.265 | -0.216 |
| hypoxia_3wks | 0.606 | 0.526 |
| hypoxia_6wks | 1.05 | 0.134 |
| glycerol | -0.758 | -1.334 |
| cholesterol | -0.847 | -1.007 |
| AJ | 0.61 | 0.025 |
| Bibs02 | -1.482 | -0.722 |
| Bibs02c | 0.523 | -0.761 |
| BL6 | -0.469 | -2.36 |
| BL6a | 0.096 | -1.164 |
| BXD01 | -1.153 | -0.906 |
| BXD010 | -1.535 | -1.329 |
| BXD011 | -0.987 | -0.877 |
| BXD03 | -0.957 | -1.543 |
| BXD04 | -0.587 | -0.041 |
| BXD05 | -2.116 | -0.628 |
| BXD06 | -1.747 | -1.089 |
| BXD07 | -1.281 | -0.973 |
| BXD08 | -0.378 | -1.033 |
| BXD09 | -0.95 | -1.008 |
| CAST | -0.24 | 0.33 |
| CCcont | -1.057 | -1.534 |
| DS01 | -0.57 | -0.087 |
| DS02 | 0.515 | 0.325 |
| DS04 | 1.13 | -0.725 |
| DS0c | 0.625 | -0.514 |
| GP01 | 0.699 | -0.752 |
| GP02 | 2.043 | 1.075 |
| GP0c | -0.066 | -0.267 |
| NOD | 2.724 | 0.566 |
| NZO | 0.364 | -0.066 |
| PWK | -0.783 | 0.361 |
| H37Rv_KO_CtpC | -0.498 | -1.04 |
| H37Rv_KO_CtpD | -1.814 | -1.754 |
| H37Rv_KO_Rv1272 | 1.627 | -0.579 |
| H37Rv_KO_SugABC | 1.04 | 0.474 |
| H37Rv_KO_MbtN | 0.113 | -1.456 |
| Trans05 | -0.459 | -0.594 |
| macrophage_unactivated | -0.316 | -0.789 |
| IL1 | 0.276 | -0.03 |
| Rapamycin | -0.632 | -0.178 |
| Tcell | 0.303 | -0.492 |
| GMCSF | 0.124 | -0.343 |
| IFNab | -0.148 | -0.239 |
| IFNg | 0.484 | 0.569 |
| IFNg_GMCSF1 | 0.148 | -0.031 |
| Rv1432_day32 | -0.568 | -0.18 |
| Rv1565c_day32 | -0.553 | -0.547 |
| secA2_input | 1.52 | -0.789 |
| delta_Rv3594 | 1.227 | 0.759 |
| delta_Rv3717 | 1.436 | 0.648 |
| delta_Rv3811 | 0.306 | 0.97 |
| delta_Rv0954 | 0.225 | 0.416 |
| PonA1 | 0.275 | -0.172 |
| EccD1_KO | -0.335 | -0.033 |
| EspI_KO | 0.271 | 1.178 |
| PE35_KO | 0.86 | 0.111 |
| PPE68_KO | 0.496 | 0.032 |
| glycerol2 | -0.475 | -0.545 |
| lignocerate | -1.259 | -0.961 |
| oleate | -0.147 | 0.084 |
| phosphatidylcholine | -0.727 | -0.545 |
| acetate | -0.708 | -0.843 |
| glucAc | -2.033 | -1.39 |
| Rv0950ko | -0.501 | 0.666 |
| Rv1096ko | -1.068 | 0.784 |
| Rv3684ko | -0.544 | 1.12 |
| delta_otsA_trehalose | 0.696 | 0.009 |