Top 10 genes with highest correlation to Rv1825/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1823/- | (cc=0.8321) | info on Rv1823/- |
| Rv0012/- | (cc=0.7058) | info on Rv0012/- |
| Rv1824/- | (cc=0.6987) | info on Rv1824/- |
| Rv2203/- | (cc=0.6644) | info on Rv2203/- |
| Rv0483/lprQ | (cc=0.6361) | info on Rv0483/lprQ |
| Rv2171/lppM | (cc=0.6342) | info on Rv2171/lppM |
| Rv2091c/- | (cc=0.6289) | info on Rv2091c/- |
| Rv0537c/- | (cc=0.5688) | info on Rv0537c/- |
| Rv3586/- | (cc=0.5635) | info on Rv3586/- |
| Rv3682/ponA2 | (cc=0.5484) | info on Rv3682/ponA2 |
Correlation of Rv1825/- with Rv1823/-
Normalized LFCs for Rv1825/-:
(description and provenance of datasets)
| Rv1825/- | Rv1823/- | |
| Fe_supp_jason_reseq | 1.331 | 2.807 |
| low_pH_jason_reseq | 0.882 | 1.302 |
| NO_jason_reseq | 0.11 | -1.273 |
| B6_jason_reseq | -0.201 | 0.723 |
| MHCII_jason_reseq | 1.275 | 0.818 |
| Isoniazid02 | -0.159 | -0.074 |
| Rifampicin4 | -2.139 | -2.989 |
| Ethambutol3 | -1.25 | -1.369 |
| Meropenem3 | -0.98 | -0.63 |
| Vancomycin16 | -4.117 | -4.717 |
| Rv2680_day32 | -2.124 | -2.814 |
| H37Rv_KO_MarP | 5.297 | 5.537 |
| hypoxia_3wks | -0.526 | -1.483 |
| hypoxia_6wks | -1.666 | -2.088 |
| glycerol | 0.592 | 0.056 |
| cholesterol | -0.55 | -0.676 |
| AJ | -1.175 | -1.849 |
| Bibs02 | -1.93 | -0.525 |
| Bibs02c | -0.576 | -1.269 |
| BL6 | -2.518 | -2.291 |
| BL6a | -0.854 | -1.637 |
| BXD01 | -1.168 | -2.743 |
| BXD010 | -2.64 | -2.697 |
| BXD011 | -1.081 | -1.517 |
| BXD03 | -1.008 | -2.848 |
| BXD04 | -0.098 | -2.481 |
| BXD05 | -2.097 | -2.465 |
| BXD06 | -1.689 | -2.811 |
| BXD07 | -1.515 | -2.777 |
| BXD08 | -0.491 | -2.668 |
| BXD09 | -1.95 | -2.959 |
| CAST | -2.302 | -2.459 |
| CCcont | -0.118 | 0.021 |
| DS01 | -2.989 | -3.389 |
| DS02 | -2.379 | -3.121 |
| DS04 | -3.277 | -3.009 |
| DS0c | -1.075 | -1.86 |
| GP01 | -2.036 | -1.808 |
| GP02 | -1.849 | -1.669 |
| GP0c | -0.797 | -0.924 |
| NOD | -1.738 | -2.312 |
| NZO | -1.126 | -3.094 |
| PWK | -3.53 | -3.44 |
| H37Rv_KO_CtpC | 0.066 | 0.067 |
| H37Rv_KO_CtpD | -0.808 | 0.035 |
| H37Rv_KO_Rv1272 | 0.574 | -1.166 |
| H37Rv_KO_SugABC | -0.657 | -1.987 |
| H37Rv_KO_MbtN | -0.57 | -0.952 |
| Trans05 | -0.536 | -1.345 |
| macrophage_unactivated | 0.978 | 0.0 |
| IL1 | 1.124 | -0.243 |
| Rapamycin | 0.424 | 0.239 |
| Tcell | 0.0 | -0.554 |
| GMCSF | 0.499 | -0.694 |
| IFNab | -0.762 | -0.795 |
| IFNg | -0.238 | 0.208 |
| IFNg_GMCSF1 | 0.349 | -0.826 |
| Rv1432_day32 | -1.832 | -1.752 |
| Rv1565c_day32 | 1.72 | 1.047 |
| secA2_input | -0.142 | 1.291 |
| delta_Rv3594 | 0.0 | -0.471 |
| delta_Rv3717 | -2.035 | -2.153 |
| delta_Rv3811 | -0.291 | -1.374 |
| delta_Rv0954 | -0.575 | -1.395 |
| PonA1 | -0.226 | -0.643 |
| EccD1_KO | -1.746 | -3.526 |
| EspI_KO | -0.967 | -2.892 |
| PE35_KO | 0.306 | -0.21 |
| PPE68_KO | -0.851 | -1.344 |
| glycerol2 | -1.777 | -1.665 |
| lignocerate | -1.108 | 0.124 |
| oleate | -0.56 | -2.691 |
| phosphatidylcholine | 0.396 | 0.63 |
| acetate | 0.123 | 2.233 |
| glucAc | 0.085 | 1.894 |
| Rv0950ko | 0.443 | 0.6 |
| Rv1096ko | -1.888 | -2.962 |
| Rv3684ko | -0.668 | -0.059 |
| delta_otsA_trehalose | -0.725 | 0.289 |