Top 10 genes with highest correlation to Rv1746/pknF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1291c/- | (cc=0.5267) | info on Rv1291c/- |
| Rv1766/- | (cc=0.5202) | info on Rv1766/- |
| Rv1902c/nanT | (cc=0.4989) | info on Rv1902c/nanT |
| Rv1668c/- | (cc=0.4855) | info on Rv1668c/- |
| Rv2458/mmuM | (cc=0.4844) | info on Rv2458/mmuM |
| Rv2556c/- | (cc=0.4837) | info on Rv2556c/- |
| Rv1638A/- | (cc=0.4805) | info on Rv1638A/- |
| Rv1935c/echA13 | (cc=0.462) | info on Rv1935c/echA13 |
| Rv0838/lpqR | (cc=0.4526) | info on Rv0838/lpqR |
| Rv2949c/- | (cc=0.4462) | info on Rv2949c/- |
Correlation of Rv1746/pknF with Rv1291c/-
Normalized LFCs for Rv1746/pknF:
(description and provenance of datasets)
| Rv1746/pknF | Rv1291c/- | |
| Fe_supp_jason_reseq | 0.62 | -0.587 |
| low_pH_jason_reseq | 0.612 | 0.646 |
| NO_jason_reseq | 0.391 | 2.956 |
| B6_jason_reseq | 0.103 | 2.722 |
| MHCII_jason_reseq | 0.881 | 3.045 |
| Isoniazid02 | 0.167 | -0.265 |
| Rifampicin4 | -0.252 | 0.162 |
| Ethambutol3 | -0.263 | -0.344 |
| Meropenem3 | 0.071 | -0.105 |
| Vancomycin16 | -0.602 | 0.31 |
| Rv2680_day32 | 0.196 | 1.533 |
| H37Rv_KO_MarP | 0.344 | 1.456 |
| hypoxia_3wks | 0.0 | -0.502 |
| hypoxia_6wks | -0.115 | 0.173 |
| glycerol | -0.547 | -0.398 |
| cholesterol | -0.548 | -0.358 |
| AJ | -0.18 | -0.422 |
| Bibs02 | -0.294 | -1.816 |
| Bibs02c | -0.293 | -0.229 |
| BL6 | -0.42 | -2.27 |
| BL6a | -0.95 | -0.762 |
| BXD01 | -0.188 | -1.445 |
| BXD010 | -0.555 | -1.659 |
| BXD011 | -0.502 | -2.209 |
| BXD03 | -0.229 | -2.802 |
| BXD04 | -0.131 | -1.034 |
| BXD05 | -0.154 | -2.275 |
| BXD06 | -0.306 | -1.974 |
| BXD07 | 0.156 | -2.312 |
| BXD08 | -0.108 | -0.294 |
| BXD09 | -0.315 | -2.166 |
| CAST | -0.506 | -0.257 |
| CCcont | -0.689 | -2.402 |
| DS01 | -0.154 | -0.371 |
| DS02 | -0.466 | -1.126 |
| DS04 | -0.295 | 0.849 |
| DS0c | -0.041 | -0.368 |
| GP01 | -0.235 | -3.926 |
| GP02 | -0.109 | -2.833 |
| GP0c | -0.43 | -3.286 |
| NOD | -0.314 | -0.555 |
| NZO | -0.195 | -0.579 |
| PWK | -0.112 | -0.308 |
| H37Rv_KO_CtpC | -0.928 | -2.346 |
| H37Rv_KO_CtpD | -1.35 | -4.119 |
| H37Rv_KO_Rv1272 | 0.731 | 0.093 |
| H37Rv_KO_SugABC | 0.826 | -2.458 |
| H37Rv_KO_MbtN | -1.247 | -2.326 |
| Trans05 | -0.251 | -2.857 |
| macrophage_unactivated | -0.312 | -2.661 |
| IL1 | -0.51 | -2.058 |
| Rapamycin | -0.304 | -1.755 |
| Tcell | -0.169 | -0.205 |
| GMCSF | 0.85 | 0.0 |
| IFNab | -0.181 | -1.246 |
| IFNg | -0.16 | -2.336 |
| IFNg_GMCSF1 | 0.091 | 1.467 |
| Rv1432_day32 | 0.441 | -0.254 |
| Rv1565c_day32 | -0.284 | -0.297 |
| secA2_input | 0.0 | 0.066 |
| delta_Rv3594 | 0.688 | 0.991 |
| delta_Rv3717 | 0.306 | 1.847 |
| delta_Rv3811 | 0.049 | 3.618 |
| delta_Rv0954 | 0.633 | 1.875 |
| PonA1 | 1.18 | 2.223 |
| EccD1_KO | 1.746 | 0.536 |
| EspI_KO | 0.838 | 1.058 |
| PE35_KO | 0.359 | 0.309 |
| PPE68_KO | 0.394 | -0.051 |
| glycerol2 | -0.688 | -0.801 |
| lignocerate | 0.018 | -0.697 |
| oleate | 0.427 | -0.098 |
| phosphatidylcholine | 0.273 | -0.441 |
| acetate | -0.648 | -1.596 |
| glucAc | -0.374 | -0.826 |
| Rv0950ko | 0.0 | 0.7 |
| Rv1096ko | -0.688 | 0.383 |
| Rv3684ko | -0.684 | -0.088 |
| delta_otsA_trehalose | 1.078 | 0.026 |