Top 10 genes with highest correlation to Rv1349/irtB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1348/irtA | (cc=0.621) | info on Rv1348/irtA |
| Rv0470c/pcaA | (cc=0.5537) | info on Rv0470c/pcaA |
| Rv1286/cysN | (cc=0.4912) | info on Rv1286/cysN |
| Rv1285/cysD | (cc=0.4701) | info on Rv1285/cysD |
| Rv2680/- | (cc=0.4621) | info on Rv2680/- |
| Rv2334/cysK1 | (cc=0.4577) | info on Rv2334/cysK1 |
| Rv2581c/- | (cc=0.4564) | info on Rv2581c/- |
| Rv1845c/blaR | (cc=0.4542) | info on Rv1845c/blaR |
| Rv2901c/- | (cc=0.4518) | info on Rv2901c/- |
| Rv2894c/xerC | (cc=0.4446) | info on Rv2894c/xerC |
Correlation of Rv1349/irtB with Rv1348/irtA
Normalized LFCs for Rv1349/irtB:
(description and provenance of datasets)
| Rv1349/irtB | Rv1348/irtA | |
| Fe_supp_jason_reseq | 1.847 | 2.452 |
| low_pH_jason_reseq | 2.844 | 1.233 |
| NO_jason_reseq | -0.69 | -0.845 |
| B6_jason_reseq | -0.292 | -0.496 |
| MHCII_jason_reseq | -0.257 | -0.572 |
| Isoniazid02 | -0.201 | 0.156 |
| Rifampicin4 | -0.374 | 0.0 |
| Ethambutol3 | -0.168 | 0.0 |
| Meropenem3 | -0.165 | -0.138 |
| Vancomycin16 | -0.366 | -0.305 |
| Rv2680_day32 | -0.131 | -0.908 |
| H37Rv_KO_MarP | -0.586 | -1.123 |
| hypoxia_3wks | -0.55 | -0.502 |
| hypoxia_6wks | 0.0 | 0.0 |
| glycerol | -0.856 | -1.153 |
| cholesterol | -0.614 | -0.972 |
| AJ | -0.983 | -1.556 |
| Bibs02 | -0.273 | 0.446 |
| Bibs02c | -0.887 | -0.243 |
| BL6 | -0.53 | -0.839 |
| BL6a | -0.839 | -0.356 |
| BXD01 | -0.552 | -0.744 |
| BXD010 | -0.543 | -0.859 |
| BXD011 | -0.412 | -0.612 |
| BXD03 | -0.573 | -0.772 |
| BXD04 | -0.4 | -0.49 |
| BXD05 | -0.57 | -0.903 |
| BXD06 | -0.566 | -0.762 |
| BXD07 | -0.587 | -0.79 |
| BXD08 | -0.564 | -0.892 |
| BXD09 | -0.596 | -0.943 |
| CAST | -0.537 | -1.106 |
| CCcont | 0.196 | 0.49 |
| DS01 | 0.0 | 0.0 |
| DS02 | 1.251 | 0.435 |
| DS04 | -0.453 | -1.107 |
| DS0c | 0.0 | 0.53 |
| GP01 | -0.418 | -0.662 |
| GP02 | -0.353 | -0.558 |
| GP0c | -0.551 | -0.872 |
| NOD | -0.524 | -0.89 |
| NZO | -0.465 | -1.338 |
| PWK | -0.831 | -1.316 |
| H37Rv_KO_CtpC | -0.379 | -0.292 |
| H37Rv_KO_CtpD | -0.41 | -0.502 |
| H37Rv_KO_Rv1272 | -0.598 | -0.805 |
| H37Rv_KO_SugABC | -0.231 | -0.565 |
| H37Rv_KO_MbtN | -0.154 | -0.495 |
| Trans05 | -0.423 | -0.746 |
| macrophage_unactivated | -0.436 | -1.016 |
| IL1 | 0.374 | -0.297 |
| Rapamycin | 0.0 | -0.307 |
| Tcell | 0.0 | 0.0 |
| GMCSF | -0.364 | -1.545 |
| IFNab | -0.417 | -0.973 |
| IFNg | -0.369 | -1.195 |
| IFNg_GMCSF1 | -0.434 | -1.405 |
| Rv1432_day32 | -0.18 | -0.884 |
| Rv1565c_day32 | 0.0 | -0.351 |
| secA2_input | -1.061 | 0.0 |
| delta_Rv3594 | -1.436 | -0.967 |
| delta_Rv3717 | -1.339 | -1.881 |
| delta_Rv3811 | -1.224 | -1.557 |
| delta_Rv0954 | -0.083 | 0.226 |
| PonA1 | 0.792 | 0.621 |
| EccD1_KO | -1.121 | 0.474 |
| EspI_KO | -0.973 | 0.0 |
| PE35_KO | 0.983 | 1.779 |
| PPE68_KO | -0.25 | 0.883 |
| glycerol2 | -1.153 | -0.509 |
| lignocerate | -1.296 | -0.865 |
| oleate | -1.704 | -1.202 |
| phosphatidylcholine | -1.153 | -0.657 |
| acetate | -1.368 | 0.0 |
| glucAc | -1.1 | -0.176 |
| Rv0950ko | -0.844 | 0.609 |
| Rv1096ko | 0.483 | 0.416 |
| Rv3684ko | -0.593 | 0.452 |
| delta_otsA_trehalose | -0.881 | 0.294 |