Top 10 genes with highest correlation to Rv1289/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0789c/- | (cc=0.6574) | info on Rv0789c/- |
| Rv2019/- | (cc=0.6429) | info on Rv2019/- |
| Rv1718/- | (cc=0.6185) | info on Rv1718/- |
| Rv2532c/- | (cc=0.6041) | info on Rv2532c/- |
| Rv1541c/lprI | (cc=0.5761) | info on Rv1541c/lprI |
| Rv2237A/- | (cc=0.5594) | info on Rv2237A/- |
| Rv1738/- | (cc=0.5439) | info on Rv1738/- |
| Rv2008c/- | (cc=0.5415) | info on Rv2008c/- |
| Rv1038c/esxJ | (cc=0.5384) | info on Rv1038c/esxJ |
| Rv0964c/- | (cc=0.5345) | info on Rv0964c/- |
Correlation of Rv1289/- with Rv0789c/-
Normalized LFCs for Rv1289/-:
(description and provenance of datasets)
| Rv1289/- | Rv0789c/- | |
| Fe_supp_jason_reseq | 0.666 | -0.073 |
| low_pH_jason_reseq | -0.099 | 0.284 |
| NO_jason_reseq | 0.659 | -1.362 |
| B6_jason_reseq | 1.077 | -0.395 |
| MHCII_jason_reseq | 0.6 | 0.449 |
| Isoniazid02 | 1.077 | -0.073 |
| Rifampicin4 | 0.162 | -0.815 |
| Ethambutol3 | 0.073 | -0.519 |
| Meropenem3 | 0.299 | -0.272 |
| Vancomycin16 | 0.334 | -0.167 |
| Rv2680_day32 | -1.138 | 0.222 |
| H37Rv_KO_MarP | -0.277 | -0.714 |
| hypoxia_3wks | -1.013 | -1.328 |
| hypoxia_6wks | 0.0 | 0.23 |
| glycerol | -0.54 | -0.873 |
| cholesterol | 0.208 | -0.682 |
| AJ | 0.024 | 0.02 |
| Bibs02 | -0.538 | -0.699 |
| Bibs02c | 0.547 | 0.018 |
| BL6 | -1.07 | -1.162 |
| BL6a | -0.608 | -0.405 |
| BXD01 | -0.634 | -0.307 |
| BXD010 | 0.395 | 0.104 |
| BXD011 | -0.707 | -1.379 |
| BXD03 | -0.847 | -0.768 |
| BXD04 | -1.276 | -0.667 |
| BXD05 | 0.24 | -0.707 |
| BXD06 | -0.374 | -1.847 |
| BXD07 | -0.652 | -1.23 |
| BXD08 | -1.233 | -0.68 |
| BXD09 | -0.962 | -0.47 |
| CAST | 1.485 | -0.332 |
| CCcont | -0.213 | -0.383 |
| DS01 | 0.441 | -0.021 |
| DS02 | 0.551 | -0.151 |
| DS04 | 1.06 | 1.314 |
| DS0c | 0.46 | 0.141 |
| GP01 | 0.242 | -0.133 |
| GP02 | -0.858 | -1.1 |
| GP0c | -0.551 | 0.0 |
| NOD | 1.041 | -0.303 |
| NZO | -0.192 | 1.224 |
| PWK | -0.02 | -0.246 |
| H37Rv_KO_CtpC | 1.16 | 0.412 |
| H37Rv_KO_CtpD | 0.911 | -1.97 |
| H37Rv_KO_Rv1272 | 0.718 | 0.069 |
| H37Rv_KO_SugABC | 0.547 | 0.403 |
| H37Rv_KO_MbtN | -0.184 | -1.769 |
| Trans05 | 0.857 | 1.333 |
| macrophage_unactivated | 0.335 | 0.776 |
| IL1 | 1.05 | 2.658 |
| Rapamycin | 0.055 | -0.433 |
| Tcell | -0.775 | 0.71 |
| GMCSF | 0.095 | -1.125 |
| IFNab | 0.85 | 0.744 |
| IFNg | 0.048 | -0.091 |
| IFNg_GMCSF1 | 0.738 | 1.279 |
| Rv1432_day32 | 0.129 | 1.095 |
| Rv1565c_day32 | 0.0 | 0.344 |
| secA2_input | -0.625 | -0.434 |
| delta_Rv3594 | -0.148 | -0.889 |
| delta_Rv3717 | -0.209 | 0.228 |
| delta_Rv3811 | -0.318 | -0.772 |
| delta_Rv0954 | -0.423 | -0.974 |
| PonA1 | -0.57 | -0.791 |
| EccD1_KO | 2.453 | 1.22 |
| EspI_KO | 1.118 | 0.499 |
| PE35_KO | 1.313 | 1.164 |
| PPE68_KO | 1.616 | 0.803 |
| glycerol2 | 1.801 | 3.129 |
| lignocerate | 2.489 | 3.78 |
| oleate | -0.961 | 0.196 |
| phosphatidylcholine | 2.531 | 2.994 |
| acetate | 2.534 | 3.712 |
| glucAc | 2.382 | 3.388 |
| Rv0950ko | -0.597 | 0.223 |
| Rv1096ko | -1.288 | 1.252 |
| Rv3684ko | -0.511 | 0.658 |
| delta_otsA_trehalose | -0.672 | -1.059 |