Top 10 genes with highest correlation to Rv1256c/cyp130:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1706c/PPE23 | (cc=0.4465) | info on Rv1706c/PPE23 |
| Rv1934c/fadE17 | (cc=0.4203) | info on Rv1934c/fadE17 |
| Rv3238c/- | (cc=0.4188) | info on Rv3238c/- |
| Rv0117/oxyS | (cc=0.4026) | info on Rv0117/oxyS |
| Rv1030/kdpB | (cc=0.4004) | info on Rv1030/kdpB |
| Rv1188/- | (cc=0.3984) | info on Rv1188/- |
| Rv1238/sugC | (cc=0.3813) | info on Rv1238/sugC |
| Rv1964/yrbE3A | (cc=0.3811) | info on Rv1964/yrbE3A |
| Rv2498c/citE | (cc=0.3799) | info on Rv2498c/citE |
| Rv0886/fprB | (cc=0.379) | info on Rv0886/fprB |
Correlation of Rv1256c/cyp130 with Rv3238c/-
Normalized LFCs for Rv1256c/cyp130:
(description and provenance of datasets)
| Rv1256c/cyp130 | Rv3238c/- | |
| Fe_supp_jason_reseq | 0.076 | -0.284 |
| low_pH_jason_reseq | -0.316 | -1.181 |
| NO_jason_reseq | -0.331 | -0.412 |
| B6_jason_reseq | -0.917 | -0.232 |
| MHCII_jason_reseq | 0.252 | 0.04 |
| Isoniazid02 | 0.01 | 0.583 |
| Rifampicin4 | 0.038 | 0.412 |
| Ethambutol3 | 0.268 | 1.198 |
| Meropenem3 | -0.214 | 0.873 |
| Vancomycin16 | 0.233 | 0.09 |
| Rv2680_day32 | -0.178 | -0.093 |
| H37Rv_KO_MarP | -0.025 | 0.426 |
| hypoxia_3wks | 0.423 | -0.227 |
| hypoxia_6wks | 0.877 | 0.019 |
| glycerol | -0.753 | -0.834 |
| cholesterol | -0.834 | -0.074 |
| AJ | -0.057 | 0.282 |
| Bibs02 | -0.527 | -0.57 |
| Bibs02c | -0.708 | 0.441 |
| BL6 | -0.199 | -0.079 |
| BL6a | -0.587 | 0.184 |
| BXD01 | -0.245 | 0.159 |
| BXD010 | -0.511 | -0.315 |
| BXD011 | -0.337 | 0.0 |
| BXD03 | 0.135 | 0.249 |
| BXD04 | -0.17 | 0.702 |
| BXD05 | -0.6 | -0.225 |
| BXD06 | -0.016 | 0.249 |
| BXD07 | -0.221 | 0.174 |
| BXD08 | -0.067 | -0.2 |
| BXD09 | -0.295 | -0.041 |
| CAST | -0.015 | 0.082 |
| CCcont | -0.105 | 0.031 |
| DS01 | -0.074 | 0.14 |
| DS02 | -0.644 | 0.307 |
| DS04 | 0.0 | 0.72 |
| DS0c | 0.616 | 0.399 |
| GP01 | 0.458 | 0.234 |
| GP02 | -0.175 | 0.51 |
| GP0c | -0.284 | -0.267 |
| NOD | 0.552 | 0.519 |
| NZO | -0.543 | -0.202 |
| PWK | -0.442 | 0.59 |
| H37Rv_KO_CtpC | -0.269 | 0.781 |
| H37Rv_KO_CtpD | -0.306 | -0.056 |
| H37Rv_KO_Rv1272 | -0.812 | 0.424 |
| H37Rv_KO_SugABC | -1.113 | 0.385 |
| H37Rv_KO_MbtN | 1.113 | 0.479 |
| Trans05 | -0.032 | 0.706 |
| macrophage_unactivated | 0.325 | 0.259 |
| IL1 | 0.513 | 0.033 |
| Rapamycin | -0.276 | 0.0 |
| Tcell | -0.033 | 0.055 |
| GMCSF | 0.343 | 0.576 |
| IFNab | -0.03 | 0.148 |
| IFNg | 0.834 | 0.807 |
| IFNg_GMCSF1 | 0.295 | 0.437 |
| Rv1432_day32 | -0.845 | -0.137 |
| Rv1565c_day32 | 0.235 | -0.141 |
| secA2_input | -1.027 | -0.507 |
| delta_Rv3594 | -0.58 | 0.401 |
| delta_Rv3717 | -0.374 | -0.059 |
| delta_Rv3811 | -0.375 | -0.15 |
| delta_Rv0954 | 0.833 | 0.243 |
| PonA1 | -0.493 | -0.34 |
| EccD1_KO | -0.072 | 0.316 |
| EspI_KO | -0.094 | 1.212 |
| PE35_KO | 0.543 | 1.03 |
| PPE68_KO | 0.307 | 1.088 |
| glycerol2 | 0.479 | 0.502 |
| lignocerate | 0.342 | 0.514 |
| oleate | 0.495 | 0.625 |
| phosphatidylcholine | 0.552 | 0.501 |
| acetate | -0.042 | 0.105 |
| glucAc | 0.156 | 0.016 |
| Rv0950ko | 0.347 | 0.289 |
| Rv1096ko | 0.585 | -0.166 |
| Rv3684ko | 1.055 | 0.727 |
| delta_otsA_trehalose | -1.395 | -0.38 |