Top 10 genes with highest correlation to Rv0875c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.5084) | info on Rv1287/- |
| Rv1957/- | (cc=0.4839) | info on Rv1957/- |
| Rv1446c/opcA | (cc=0.4769) | info on Rv1446c/opcA |
| Rv1274/lprB | (cc=0.4761) | info on Rv1274/lprB |
| Rv2467/pepN | (cc=0.4703) | info on Rv2467/pepN |
| Rv0228/- | (cc=0.467) | info on Rv0228/- |
| Rv1180/pks3 | (cc=0.4527) | info on Rv1180/pks3 |
| Rv2032/acg | (cc=0.4496) | info on Rv2032/acg |
| Rv3175/- | (cc=0.4494) | info on Rv3175/- |
| Rv0006/gyrA | (cc=0.4444) | info on Rv0006/gyrA |
Correlation of Rv0875c/- with Rv1287/-
Normalized LFCs for Rv0875c/-:
(description and provenance of datasets)
| Rv0875c/- | Rv1287/- | |
| Fe_supp_jason_reseq | 1.274 | 2.9 |
| low_pH_jason_reseq | 2.844 | 0.323 |
| NO_jason_reseq | -0.331 | -0.583 |
| B6_jason_reseq | 0.97 | 0.571 |
| MHCII_jason_reseq | 1.244 | 0.098 |
| Isoniazid02 | 0.383 | 0.805 |
| Rifampicin4 | -0.558 | -0.374 |
| Ethambutol3 | 0.415 | 0.822 |
| Meropenem3 | 1.899 | 0.633 |
| Vancomycin16 | 0.247 | -0.31 |
| Rv2680_day32 | -1.357 | -2.282 |
| H37Rv_KO_MarP | -0.157 | 0.24 |
| hypoxia_3wks | 0.0 | -2.999 |
| hypoxia_6wks | -0.263 | -2.714 |
| glycerol | -0.686 | -0.66 |
| cholesterol | 0.722 | 2.591 |
| AJ | -0.442 | -1.44 |
| Bibs02 | 1.216 | -0.309 |
| Bibs02c | -0.711 | -0.64 |
| BL6 | -0.768 | -2.144 |
| BL6a | -0.377 | -2.04 |
| BXD01 | -0.8 | -2.037 |
| BXD010 | -0.787 | -1.759 |
| BXD011 | -0.655 | -2.084 |
| BXD03 | -0.831 | -1.284 |
| BXD04 | -0.76 | -1.934 |
| BXD05 | -0.827 | -1.929 |
| BXD06 | -0.351 | -1.914 |
| BXD07 | -0.851 | -1.315 |
| BXD08 | -0.817 | -1.827 |
| BXD09 | -0.863 | -2.409 |
| CAST | -0.284 | -1.779 |
| CCcont | -0.285 | -0.729 |
| DS01 | -1.001 | -0.772 |
| DS02 | -1.336 | -0.758 |
| DS04 | -1.192 | -0.593 |
| DS0c | -1.332 | -0.069 |
| GP01 | -0.607 | -1.865 |
| GP02 | -0.511 | -1.654 |
| GP0c | -0.799 | -2.455 |
| NOD | -1.38 | -1.886 |
| NZO | -1.225 | -2.419 |
| PWK | -0.666 | -1.391 |
| H37Rv_KO_CtpC | 0.0 | 0.872 |
| H37Rv_KO_CtpD | -0.537 | -0.683 |
| H37Rv_KO_Rv1272 | -0.174 | -1.513 |
| H37Rv_KO_SugABC | -0.608 | -1.251 |
| H37Rv_KO_MbtN | 0.166 | -1.062 |
| Trans05 | -0.672 | -1.721 |
| macrophage_unactivated | -0.83 | -0.12 |
| IL1 | -0.78 | -1.967 |
| Rapamycin | -0.807 | -0.761 |
| Tcell | -0.857 | 0.358 |
| GMCSF | -0.694 | -0.776 |
| IFNab | -0.795 | 0.435 |
| IFNg | -0.703 | -1.179 |
| IFNg_GMCSF1 | -0.826 | -1.225 |
| Rv1432_day32 | 0.0 | -0.787 |
| Rv1565c_day32 | 0.13 | 3.074 |
| secA2_input | 2.678 | 0.023 |
| delta_Rv3594 | -0.855 | 2.232 |
| delta_Rv3717 | 0.064 | 0.81 |
| delta_Rv3811 | -0.831 | 0.779 |
| delta_Rv0954 | 0.618 | 4.017 |
| PonA1 | -0.931 | 1.101 |
| EccD1_KO | 0.306 | 1.151 |
| EspI_KO | 2.567 | 2.321 |
| PE35_KO | 0.137 | 1.473 |
| PPE68_KO | 0.15 | 2.342 |
| glycerol2 | -0.531 | -0.43 |
| lignocerate | -0.462 | 0.675 |
| oleate | -0.537 | -0.603 |
| phosphatidylcholine | -0.531 | -0.043 |
| acetate | 0.178 | 0.025 |
| glucAc | -0.392 | 0.122 |
| Rv0950ko | -0.89 | -0.045 |
| Rv1096ko | 0.0 | 0.353 |
| Rv3684ko | 0.802 | 1.484 |
| delta_otsA_trehalose | 1.33 | 1.312 |