Top 10 genes with highest correlation to Rv0746/PE_PGRS9:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0332/- | (cc=0.4071) | info on Rv0332/- |
| Rv1060/- | (cc=0.4057) | info on Rv1060/- |
| Rv1691/- | (cc=0.3945) | info on Rv1691/- |
| Rv0747/PE_PGRS10 | (cc=0.387) | info on Rv0747/PE_PGRS10 |
| Rv1647/- | (cc=0.3855) | info on Rv1647/- |
| Rv3508/PE_PGRS54 | (cc=0.3846) | info on Rv3508/PE_PGRS54 |
| Rv1180/pks3 | (cc=0.3818) | info on Rv1180/pks3 |
| Rv2645/- | (cc=0.3685) | info on Rv2645/- |
| Rv0428c/- | (cc=0.3647) | info on Rv0428c/- |
| Rv3766/- | (cc=0.3644) | info on Rv3766/- |
Correlation of Rv0746/PE_PGRS9 with Rv0332/-
Normalized LFCs for Rv0746/PE_PGRS9:
(description and provenance of datasets)
| Rv0746/PE_PGRS9 | Rv0332/- | |
| Fe_supp_jason_reseq | 1.321 | 0.627 |
| low_pH_jason_reseq | 1.84 | -0.512 |
| NO_jason_reseq | -1.089 | -0.727 |
| B6_jason_reseq | 1.7 | 0.454 |
| MHCII_jason_reseq | 2.165 | 1.256 |
| Isoniazid02 | -0.212 | 0.049 |
| Rifampicin4 | 0.073 | 0.019 |
| Ethambutol3 | 0.221 | -0.236 |
| Meropenem3 | -0.25 | 2.033 |
| Vancomycin16 | -0.91 | 0.056 |
| Rv2680_day32 | -0.177 | -0.932 |
| H37Rv_KO_MarP | -0.289 | 0.066 |
| hypoxia_3wks | 0.104 | -0.183 |
| hypoxia_6wks | 0.186 | 0.094 |
| glycerol | 0.439 | 0.878 |
| cholesterol | 0.295 | 0.069 |
| AJ | 1.163 | -0.089 |
| Bibs02 | 1.187 | 0.605 |
| Bibs02c | 0.964 | 0.611 |
| BL6 | -0.809 | -0.299 |
| BL6a | 0.555 | 0.151 |
| BXD01 | 1.277 | -0.155 |
| BXD010 | -0.175 | -0.236 |
| BXD011 | -0.519 | -0.568 |
| BXD03 | 0.536 | -0.975 |
| BXD04 | 1.072 | -0.307 |
| BXD05 | 0.292 | -1.152 |
| BXD06 | -0.544 | -0.758 |
| BXD07 | -0.14 | -0.61 |
| BXD08 | 0.513 | 0.115 |
| BXD09 | -0.046 | -0.911 |
| CAST | 0.143 | 0.215 |
| CCcont | -0.233 | -0.968 |
| DS01 | -0.157 | 0.228 |
| DS02 | -0.145 | 0.476 |
| DS04 | 1.39 | 0.365 |
| DS0c | -0.107 | 0.597 |
| GP01 | 0.683 | 1.178 |
| GP02 | 0.562 | 0.119 |
| GP0c | 1.072 | 0.92 |
| NOD | -0.35 | 0.887 |
| NZO | 1.115 | -0.179 |
| PWK | 0.426 | -0.023 |
| H37Rv_KO_CtpC | 0.552 | -0.427 |
| H37Rv_KO_CtpD | -0.27 | -0.447 |
| H37Rv_KO_Rv1272 | 0.543 | 0.0 |
| H37Rv_KO_SugABC | -1.076 | 0.075 |
| H37Rv_KO_MbtN | -0.051 | -0.823 |
| Trans05 | 0.231 | -0.194 |
| macrophage_unactivated | -0.41 | -0.565 |
| IL1 | 0.074 | -0.611 |
| Rapamycin | -0.399 | -0.988 |
| Tcell | 0.951 | -0.16 |
| GMCSF | -0.135 | -0.544 |
| IFNab | -0.916 | -0.568 |
| IFNg | -2.061 | -1.376 |
| IFNg_GMCSF1 | 0.654 | -0.449 |
| Rv1432_day32 | 0.113 | 0.051 |
| Rv1565c_day32 | -0.766 | -0.27 |
| secA2_input | 0.067 | -0.783 |
| delta_Rv3594 | 0.174 | -0.401 |
| delta_Rv3717 | 0.294 | -0.058 |
| delta_Rv3811 | -0.677 | -0.149 |
| delta_Rv0954 | -0.416 | 0.049 |
| PonA1 | -0.06 | 0.052 |
| EccD1_KO | 1.72 | 0.543 |
| EspI_KO | 1.155 | 0.488 |
| PE35_KO | -0.245 | -0.545 |
| PPE68_KO | 0.666 | -0.23 |
| glycerol2 | 0.144 | -0.2 |
| lignocerate | 0.242 | -0.284 |
| oleate | 0.315 | 0.074 |
| phosphatidylcholine | 0.553 | -0.098 |
| acetate | 0.213 | -0.825 |
| glucAc | -0.085 | -0.807 |
| Rv0950ko | -0.22 | 0.268 |
| Rv1096ko | 0.784 | 0.229 |
| Rv3684ko | 0.393 | 0.291 |
| delta_otsA_trehalose | 0.0 | -0.602 |