Top 10 genes with highest correlation to Rv0220/lipC:
update plot | correlation | link to info on gene |
---|---|---|
Rv0822c/- | (cc=0.6166) | info on Rv0822c/- |
Rv3675/- | (cc=0.5392) | info on Rv3675/- |
Rv0222/echA1 | (cc=0.534) | info on Rv0222/echA1 |
Rv3840/- | (cc=0.532) | info on Rv3840/- |
Rv1517/- | (cc=0.5306) | info on Rv1517/- |
Rv2443/dctA | (cc=0.5285) | info on Rv2443/dctA |
Rv2584c/apt | (cc=0.5261) | info on Rv2584c/apt |
Rv1720c/vapC12 | (cc=0.522) | info on Rv1720c/vapC12 |
Rv2430c/PPE41 | (cc=0.5191) | info on Rv2430c/PPE41 |
Rv3847/- | (cc=0.5191) | info on Rv3847/- |
Correlation of Rv0220/lipC with Rv0822c/-
Normalized LFCs for Rv0220/lipC:
(description and provenance of datasets)
Rv0220/lipC | Rv0822c/- | |
Fe_supp_jason_reseq | -0.172 | -0.336 |
low_pH_jason_reseq | -0.564 | -0.756 |
NO_jason_reseq | -0.551 | -0.27 |
B6_jason_reseq | -0.6 | -1.076 |
MHCII_jason_reseq | -0.075 | -0.457 |
Isoniazid02 | 0.143 | 0.109 |
Rifampicin4 | -0.596 | -0.19 |
Ethambutol3 | 0.452 | 0.764 |
Meropenem3 | 0.041 | 0.317 |
Vancomycin16 | -0.329 | 0.334 |
Rv2680_day32 | -0.125 | -0.501 |
H37Rv_KO_MarP | 0.301 | -0.617 |
hypoxia_3wks | 0.195 | 0.159 |
hypoxia_6wks | -0.106 | 0.157 |
glycerol | 0.65 | -0.161 |
cholesterol | 0.142 | 0.331 |
AJ | 0.155 | 0.353 |
Bibs02 | 1.02 | 0.144 |
Bibs02c | -0.815 | 0.502 |
BL6 | 0.304 | 0.743 |
BL6a | -0.069 | 1.042 |
BXD01 | 0.022 | 0.715 |
BXD010 | 0.506 | 1.18 |
BXD011 | 0.472 | 0.663 |
BXD03 | 1.002 | 1.16 |
BXD04 | 0.896 | 0.707 |
BXD05 | 1.107 | 0.905 |
BXD06 | 0.131 | 1.181 |
BXD07 | 0.579 | 1.02 |
BXD08 | 0.445 | 0.768 |
BXD09 | 0.435 | 1.011 |
CAST | 0.592 | 0.536 |
CCcont | -0.279 | 0.625 |
DS01 | 0.51 | 0.549 |
DS02 | 0.247 | 0.181 |
DS04 | 0.419 | 0.869 |
DS0c | 0.179 | 0.528 |
GP01 | 1.623 | 1.013 |
GP02 | 1.416 | 0.996 |
GP0c | 0.602 | 0.214 |
NOD | 0.454 | 0.83 |
NZO | -0.254 | 0.763 |
PWK | 0.311 | 1.06 |
H37Rv_KO_CtpC | -0.086 | 0.627 |
H37Rv_KO_CtpD | 0.939 | 1.105 |
H37Rv_KO_Rv1272 | 0.683 | 0.322 |
H37Rv_KO_SugABC | 0.814 | 0.431 |
H37Rv_KO_MbtN | -0.376 | 0.005 |
Trans05 | -0.576 | 0.975 |
macrophage_unactivated | 0.922 | 0.59 |
IL1 | 0.142 | 0.139 |
Rapamycin | -0.203 | 0.261 |
Tcell | -0.052 | 0.678 |
GMCSF | 0.842 | 0.961 |
IFNab | 0.638 | 0.532 |
IFNg | 0.331 | 0.326 |
IFNg_GMCSF1 | 0.663 | 0.16 |
Rv1432_day32 | 0.0 | 0.681 |
Rv1565c_day32 | -0.823 | -1.72 |
secA2_input | -0.817 | -0.517 |
delta_Rv3594 | -0.242 | -0.116 |
delta_Rv3717 | -0.307 | -0.316 |
delta_Rv3811 | -0.299 | -0.29 |
delta_Rv0954 | 0.227 | -0.649 |
PonA1 | 0.084 | -0.352 |
EccD1_KO | -0.628 | -0.5 |
EspI_KO | -0.642 | -0.117 |
PE35_KO | -0.362 | -0.23 |
PPE68_KO | -0.889 | -0.784 |
glycerol2 | 0.021 | -0.175 |
lignocerate | -0.357 | -0.524 |
oleate | 0.142 | 0.007 |
phosphatidylcholine | -0.172 | -0.62 |
acetate | -0.427 | -1.034 |
glucAc | -0.523 | -0.789 |
Rv0950ko | -0.314 | -0.335 |
Rv1096ko | 0.235 | 0.44 |
Rv3684ko | -0.94 | 0.013 |
delta_otsA_trehalose | 0.317 | 0.707 |