Top 10 genes with highest correlation to Rv0155/pntAa:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0157/pntB | (cc=0.8449) | info on Rv0157/pntB |
| Rv0247c/- | (cc=0.491) | info on Rv0247c/- |
| Rv3755c/- | (cc=0.4747) | info on Rv3755c/- |
| Rv2967c/pca | (cc=0.47) | info on Rv2967c/pca |
| Rv3848/- | (cc=0.4693) | info on Rv3848/- |
| Rv3433c/- | (cc=0.4122) | info on Rv3433c/- |
| Rv1829/- | (cc=0.4121) | info on Rv1829/- |
| Rv1638/uvrA | (cc=0.4116) | info on Rv1638/uvrA |
| Rv2140c/TB18.6 | (cc=0.3918) | info on Rv2140c/TB18.6 |
| Rv2096c/pafB | (cc=0.3896) | info on Rv2096c/pafB |
Correlation of Rv0155/pntAa with Rv0157/pntB
Normalized LFCs for Rv0155/pntAa:
(description and provenance of datasets)
| Rv0155/pntAa | Rv0157/pntB | |
| Fe_supp_jason_reseq | -0.169 | 0.685 |
| low_pH_jason_reseq | -1.506 | -0.052 |
| NO_jason_reseq | -0.638 | -0.336 |
| B6_jason_reseq | -2.466 | -2.647 |
| MHCII_jason_reseq | -2.743 | -2.331 |
| Isoniazid02 | 2.043 | 1.312 |
| Rifampicin4 | 0.864 | -0.845 |
| Ethambutol3 | 0.404 | 0.201 |
| Meropenem3 | -0.631 | -0.223 |
| Vancomycin16 | 0.345 | -0.316 |
| Rv2680_day32 | -0.454 | -0.741 |
| H37Rv_KO_MarP | 1.37 | 1.851 |
| hypoxia_3wks | -1.914 | -3.174 |
| hypoxia_6wks | -1.616 | -2.291 |
| glycerol | 1.836 | 0.856 |
| cholesterol | 0.227 | -0.503 |
| AJ | -1.187 | -0.054 |
| Bibs02 | -1.661 | -1.409 |
| Bibs02c | -2.474 | -2.176 |
| BL6 | -0.949 | -0.746 |
| BL6a | -0.71 | -0.092 |
| BXD01 | -0.9 | -0.582 |
| BXD010 | -0.521 | -0.618 |
| BXD011 | -0.8 | 0.056 |
| BXD03 | -0.094 | 0.552 |
| BXD04 | -1.028 | -0.181 |
| BXD05 | -0.616 | -0.858 |
| BXD06 | -0.838 | -0.644 |
| BXD07 | -1.151 | -0.571 |
| BXD08 | -0.415 | -0.38 |
| BXD09 | -0.439 | 0.0 |
| CAST | -0.245 | -1.373 |
| CCcont | 2.273 | 2.539 |
| DS01 | -2.342 | -2.936 |
| DS02 | -1.649 | -2.872 |
| DS04 | -1.924 | -1.081 |
| DS0c | -1.499 | -1.571 |
| GP01 | -1.167 | -1.476 |
| GP02 | -0.984 | -1.244 |
| GP0c | -1.537 | -1.826 |
| NOD | 0.713 | 1.702 |
| NZO | 0.066 | -0.822 |
| PWK | -1.232 | -0.745 |
| H37Rv_KO_CtpC | 1.566 | 2.084 |
| H37Rv_KO_CtpD | 0.161 | 0.212 |
| H37Rv_KO_Rv1272 | -1.527 | -0.63 |
| H37Rv_KO_SugABC | -0.105 | -0.408 |
| H37Rv_KO_MbtN | -0.035 | -0.294 |
| Trans05 | -0.821 | -1.071 |
| macrophage_unactivated | 1.064 | 1.079 |
| IL1 | -1.011 | -0.581 |
| Rapamycin | -1.046 | 0.417 |
| Tcell | 0.0 | 1.062 |
| GMCSF | -0.314 | -0.642 |
| IFNab | 0.112 | 0.121 |
| IFNg | -2.288 | -2.309 |
| IFNg_GMCSF1 | -1.898 | -1.59 |
| Rv1432_day32 | -1.469 | -1.113 |
| Rv1565c_day32 | -1.151 | -0.881 |
| secA2_input | 0.792 | 0.18 |
| delta_Rv3594 | -1.322 | -0.907 |
| delta_Rv3717 | -1.042 | -0.838 |
| delta_Rv3811 | -1.579 | -1.535 |
| delta_Rv0954 | 2.199 | 2.629 |
| PonA1 | -3.105 | -3.258 |
| EccD1_KO | -0.312 | -0.329 |
| EspI_KO | 0.086 | 0.83 |
| PE35_KO | 0.452 | 0.478 |
| PPE68_KO | -0.269 | 0.102 |
| glycerol2 | -0.469 | 0.646 |
| lignocerate | -1.626 | -0.264 |
| oleate | -0.645 | -0.023 |
| phosphatidylcholine | -1.612 | -0.787 |
| acetate | -0.53 | 0.291 |
| glucAc | -1.638 | -0.263 |
| Rv0950ko | -0.214 | -0.398 |
| Rv1096ko | -1.529 | -1.674 |
| Rv3684ko | 0.406 | 0.38 |
| delta_otsA_trehalose | -0.502 | -0.896 |